Posters

Van Landeghem, S., De Baets, B., Van de Peer, Y., Saeys, Y. (2009) Training a text miner to summarize bio-molecular interactions found in research articles. Machine Learning Summerschool

Van Landeghem, S., Saeys, Y., De Baets, B., Van de Peer, Y. (2008) Applying supervised learning and feature selection techniques to extract genetic interactionsfrom text. CIL PhD students day @ ECML

Abeel, T., Saeys, Y., Van de Peer, Y. (2008) Core promoter prediction in eukaryote genomes. BioMAGNet-SymBioSys workshop, Leuven, Belgium, 28/05/2008.

Abeel, T., Saeys, Y., Van de Peer, Y. (2008) ProSOM: human core promoter prediction. ISMB 2008, Toronto, Canada

Abeel, T., Saeys, Y., Van de Peer, Y. (2008) Improving precision of core promoter predictions. 4th ISCB Student Council Symposium, Toronto, Canada

Rouzé, P., Rombauts, S., Sterck, L., Lin, Y.-C., Fawcett, J., Robbens, S., Martens, C., Van de Peer, Y. (2008) Annotating genomes of eukaryotes besides human. In "From Genome to Proteome and Biological Function", BioSapiens Network of ExcellenceWorkshop, Brussels.

Van Bel, M., Saeys, Y., Van de Peer, Y. (2007) Increasing the Perfomance of Splice Site Prediction:A Feature Selection Approach. In Proceedings of the International Workshop on Machine Learning in Systems Biology 2007

Van Landeghem, S., Saeys, Y., Cornelis, C., Benotmane, M.A., Van de Peer, Y. (2007) GeneFetch: enriching gene information with text mining for automatic knowledge base construction. MLSB 2007, BBC2007, VIB 2008

Martens, C., Vandepoele, K., Van de Peer, Y. (2007) Gene family evolution of the chromalveolates based on complete genome sequences. SMBE 2007

Abeel, T., Saeys, Y., Van de Peer, Y. (2007) Eukaryotic core promoter predictionusing structural features of DNA. BBC 2007

Abeel, T., Saeys, Y., Van de Peer, Y. (2007) The Java Machine Learning Library. MLSB 2007, Evry, France

Casneuf, T., Van de Peer, Y., Huber, H. (2007) Gene Co-expression on Microarrays: Fiction or Fact?.

Abeel, T., Saeys, Y., Van de Peer, Y. (2007) Fast and accurate core promoter predictionin human. Biomag Kickoff Event, VIB seminar 2007

Abeel, T., Saeys, Y., Van de Peer, Y. (2007) Core promoter prediction for genomeannotation. Doctoral Symposium Ghent University 2007

Abeel, T., Saeys, Y., Van de Peer, Y. (2007) Core promoter identification using ensembles of classifiers. ISMB 2007, ECCB 2007, Benelearn 2007

Sterck, L., Rombauts, S., Fawcett, J., Lin, Y.-C., Robbens, S., Wuyts, J., Dierick, F., Rouzé, P., Van de Peer, Y. (2007) Eukaryotic Genome Annotation. IUAP-BioMAGNET Kick-off meeting, 2007

Michoel, T., Maere, S., Bonnet, E., Joshi, A., Saeys, Y., Van den Bulcke, T., Van Leemput, K., van Remortel, P., Kuiper, M., Marchal, K., Van de Peer, Y. (2007) Validating module network learning algorithms using simulated data. IUAP-BioMAGNET Kick-off meeting, 2007

Vandepoele, K., Casneuf, T., Van de Peer, Y. (2006) Identification of novel regulatory modules in dicot plants using expression data and comparative genomics. BBC 2006

Blomme, T., Vandepoele, K., De Bodt, S., Simillion, C., Maere, S., Van de Peer, Y. (2006) The gain and loss of genes during 600 million years of vertebrate evolution. Gent-Lille Workshop on Computational Biology

Rombauts, S., Sterck, L., Dierick, F., Robbens, S., Wuyts, J., Schiex, T., Rouzé, P., Van de Peer, Y. (2006) Eukaryote Genome annotation at the Plant Systems Biology department. BBC 2006, VIB-seminar 2006

Merks, R.M.H., Vercruysse, S., Kuiper, M., Beemster, G.T.S., Van de Peer, Y., Inzé, D. (2006) From Genes to Organisms via the Cell. BBC 2006, VIB-seminar 2006

Robbens, S., Petersen, J., Brinkmann, H., Rouzé, P., Van de Peer, Y. (2006) The ultrasmall green alga Ostreococcus unveils a unique regulation of the Calvin cycle. Gent-Lille Workshop on Computational Biology

Abeel, T., Saeys, Y., Rouzé, P., Van de Peer, Y. (2006) Structure of the promoter unraveled. BBC 2006, VIB-seminar 2006

Abeel, T., Saeys, Y., Van de Peer, Y. (2006) Improved core promoter prediction using ensembles of support vector machines. BENELEARN 2006

Sterck, L., Rombauts, S., Rouzé, P., Van de Peer, Y. (2005) The Poplar Genome Project. BBC 2005, VIB-seminar 2005

Adamse, P., Allonso-Allende, R., Bewan, M., Bonnet, E., Duclert, A., Ernst, R., James, N., May, S., Mayer, K., Mewes, H.-W., Rombauts, S., Rouzé, P., Schildknecht, B., Schoof, H., Walsh, S. (2004) Planet, a network of European plant databases.

Sterck, L., Rombauts, S., Degroeve, S., Rouzé, P., Van de Peer, Y. (2004) Poplar Genome annotation. BBC 2004, VIB-seminar 2004

Robbens, S., Rombauts, S., Degroeve, S., Khadaroo, B., Derelle, E., Ferraz, C., Cooke, R., Delseny, M., Picard, A., Demaille, J., Moreau, H., Rouzé, P., Van de Peer, Y. (2004) Annotation of the green alga Ostreococcus tauri. BBC 2004, VIB 2004

Bonnet, E., Van de Peer, Y. (2003) Hagrid, a grid computing solution chosen for the Bioinformatics and Evolutionary Genomics group at the University of Ghent. BBC 2003

Bonnet, E., Wuyts, J., Rouzé, P., Van de Peer, Y. (2003) Computational identification of Arabidopsis thaliana microRNAs.

Vandepoele, K., Simillion, C., Martens, C., Van de Peer, Y. (2003) A closer look into large-scale gene duplication in plant genomes.

Vandepoele, K., Simillion, C., Van de Peer, Y. (2003) Building networks of colinearity to study genome evolution.

Vandepoele, K., Saeys, Y., Simillion, C., Raes, J., Van de Peer, Y. (2003) Detecting microcolinearity between Arabidopsis and Rice.

Vandepoele, K., Simillion, C., Van de Peer, Y. (2003) Evidence that rice, and other cereals, are ancient aneuploids.

Simillion, C., Vandepoele, K., Rouzé, P., Van de Peer, Y. (2003) Reconstructing the duplication past of Arabidopsis thaliana.










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