util.parsers
Class GeneData

java.lang.Object
  extended by util.parsers.GeneData

public class GeneData
extends java.lang.Object


Constructor Summary
GeneData()
           
 
Method Summary
 java.util.List<java.lang.Integer> getAcceptorSites()
           
 java.util.List<java.lang.String> getBoundaries()
           
 int getCdsLength()
           
 java.util.List<java.lang.Integer> getDonorSites()
           
 int getNumExons()
           
 java.util.List<java.lang.Integer> getSplicesites()
           
 java.lang.String getStartCodon()
           
 java.lang.String getStopCodon()
           
 boolean isForwardStrand()
           
 void setAcceptorSites(java.util.List<java.lang.Integer> acceptorSites)
           
 void setBoundaries(java.util.List<java.lang.String> boundaries)
           
 void setCdsLength(int cdsLength)
           
 void setDonorSites(java.util.List<java.lang.Integer> donorSites)
           
 void setForwardStrand(boolean forwardStrand)
           
 void setNumExons(int numExons)
           
 void setSplicesites(java.util.List<java.lang.Integer> splicesites)
           
 void setStartCodon(java.lang.String startCodon)
           
 void setStopCodon(java.lang.String stopCodon)
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

GeneData

public GeneData()
Method Detail

getSplicesites

public java.util.List<java.lang.Integer> getSplicesites()

setSplicesites

public void setSplicesites(java.util.List<java.lang.Integer> splicesites)

getAcceptorSites

public java.util.List<java.lang.Integer> getAcceptorSites()

setAcceptorSites

public void setAcceptorSites(java.util.List<java.lang.Integer> acceptorSites)

getDonorSites

public java.util.List<java.lang.Integer> getDonorSites()

setDonorSites

public void setDonorSites(java.util.List<java.lang.Integer> donorSites)

isForwardStrand

public boolean isForwardStrand()

setForwardStrand

public void setForwardStrand(boolean forwardStrand)

getBoundaries

public java.util.List<java.lang.String> getBoundaries()

setBoundaries

public void setBoundaries(java.util.List<java.lang.String> boundaries)

getCdsLength

public int getCdsLength()

setCdsLength

public void setCdsLength(int cdsLength)

getNumExons

public int getNumExons()

setNumExons

public void setNumExons(int numExons)

getStartCodon

public java.lang.String getStartCodon()

setStartCodon

public void setStartCodon(java.lang.String startCodon)

getStopCodon

public java.lang.String getStopCodon()

setStopCodon

public void setStopCodon(java.lang.String stopCodon)