Software

SpliceMachine

A splice site prediction tool named SpliceMachine that
  • shows state-of-the-art prediction performance on Arabidopsis thaliana and human sequences,
  • performs a computationally fast annotation and
  • can be trained by the user on its own data.




Degroeve, S., Saeys, Y., De Baets, B., Rouzé, P., Van de Peer, Y. (2005) Predicting splice sites from high-dimensional local context representations. Bioinformatics 21(8):1332-8.



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Contact:
VIB / UGent
Bioinformatics & Evolutionary Genomics
Technologiepark 927
B-9052 Gent
BELGIUM
+32 (0) 9 33 13807 (phone)
+32 (0) 9 33 13809 (fax)
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